探针信息检索
检索基因结果信息
Assay Name: ath-miR393a-5p
miRBase Accession Number: MI0001003
miRBase Version: v22

Assay Details

Gene Family ID:

MIPF0000083, MIR393

Mature miRNA Sequence:

UCCAAAGGGAUCGCAUUGAUCC

Mature miRNA Details:



Species miRBase ID miRBase Accession Number
Arabidopsis ath-miR393a-5p MIMAT0000934
Arabidopsis ath-miR393b-5p MIMAT0000935
Amborella trichopoda atr-miR393 MIMAT0033935
Arabidopsis lyrata aly-miR393a-5p MIMAT0017539
Arabidopsis lyrata aly-miR393b-5p MIMAT0017541
Camelina sativa cas-miR393-5p MIMAT0045337
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Carica papaya cpa-miR393 MIMAT0031814
Glycine max gma-miR393c-5p MIMAT0024910
Glycine max gma-miR393d MIMAT0024911
Glycine max gma-miR393e MIMAT0024912
Glycine max gma-miR393f MIMAT0024913
Glycine max gma-miR393g MIMAT0024914
Helianthus tuberosus htu-miR393a MIMAT0025511
Helianthus tuberosus htu-miR393b MIMAT0025512
Helianthus tuberosus htu-miR393c MIMAT0025513
Manihot esculenta mes-miR393b MIMAT0029263
Solanum tuberosum stu-miR393-5p MIMAT0031324
Theobroma cacao tcc-miR393a MIMAT0020421
Zea mays zma-miR393b-5p MIMAT0013999

Stem-loop Details



Arabidopsis

Stem-loop ID ath-MIR393a
Stem-loop Accession # MI0001003
Stem-loop Sequence
AGAGGAAGGAUCCAAAGGGAUCGCAUUGAUCCUAAUUAAGGUGAAUUCUCCCCAUAUUUUCUUUAUAAUUGGCAAAUAAAUCACAAAAAUUUGCUUGGUUUUGGAUCAUGCUAUCUCUUUGGAUUCAUCCUUC
Chromosome Location Chr. 2 - 16652101 - 16652233 [+] on Build TAIR10
Mature MicroRNA miRBase Accession #: MIMAT0000934
miRBase ID: ath-miR393a-5p
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: Chr. 2 - 16652101 - 16652233 [+] on Build TAIR10

Stem-loop ID ath-MIR393b
Stem-loop Accession # MI0001004
Stem-loop Sequence
AGAGAAAGGAUCCAAAGGGAUCGCAUUGAUCCUAAUUAAGCUGAUUUAUUCCCCAAUAAUUGUUUUUUUUUUCCUUCUCAAUCGAAAGAUGGAAGAAAAACAAAUUCCAAACAUUUUGCUUACUUUUCCGGAUCAUGCGAUCUCUUUGGAUUCAUUCUUU
Chromosome Location Chr. 3 - 20691647 - 20691806 [+] on Build TAIR10
Mature MicroRNA miRBase Accession #: MIMAT0000935
miRBase ID: ath-miR393b-5p
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: Chr. 3 - 20691647 - 20691806 [+] on Build TAIR10

Amborella trichopoda

Stem-loop ID atr-MIR393
Stem-loop Accession # MI0027532
Stem-loop Sequence
UUACGGUGGAGUUACAAAAGCGGUUUUGAUCUAGUAAGAAGCGGAUUUGGGGUUGCAGAGGGUGGAGAAAUCCAAAGGGAUCGCAUUGAUCCUUUUCAGUGCAAGCGGUUUUCCAAGGAUCAUGCGGUCUCUUAGGAUGUCUCCAUCUUAAUGCAAUAAAAUUGAGCUCCUCUUGUGAAAAGACAUUGAAGGUGGUUUCAGGUGA
Chromosome Location -
Mature MicroRNA miRBase Accession #: MIMAT0033935
miRBase ID: atr-miR393
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: NA

Arabidopsis lyrata

Stem-loop ID aly-MIR393a
Stem-loop Accession # MI0014572
Stem-loop Sequence
AGCAACUAGAGGAAGGAUCCAAAGGGAUCGCAUUGAUCCUAAUAAAGGUGAAUUACCCCAAUCUUUUCUUAAUAAUUAGCAAACAAAUCAAAAAAAUUUGCUUGGUUUUGGAUCAUGCUAUCUCUUUGGAUUCAUCCUUCGGUAGCU
Chromosome Location -
Mature MicroRNA miRBase Accession #: MIMAT0017539
miRBase ID: aly-miR393a-5p
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: NA

Stem-loop ID aly-MIR393b
Stem-loop Accession # MI0014573
Stem-loop Sequence
AGCAACUAGAGAAAGCAUCCAAAGGGAUCGCAUUGAUCCUAAUUAAGCUGAUUUAUUCCCCAAUAUUUUAUUUUCCUCAUUCGAAAGUUGGAGAAAAAAAAAAAAAAUUCUAAACAUUUGCUUUCUUUUCCGGAUCAUGCGAUCUCUUUGGAUUCAUUCUUUGGUAGCU
Chromosome Location -
Mature MicroRNA miRBase Accession #: MIMAT0017541
miRBase ID: aly-miR393b-5p
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: NA

Camelina sativa

Stem-loop ID cas-MIR393
Stem-loop Accession # MI0037218
Stem-loop Sequence
AGGAUCCAAAGGGAUCGCAUUGAUCCUAAUUAAGGUGAAUUCUCCCCGUUCCAAAGAAAUCGCAAAAAAUUUGCUUGGUUUUGGAUCAUGCUAUCUCUUUGGAUUCA
Chromosome Location -
Mature MicroRNA miRBase Accession #: MIMAT0045337
miRBase ID: cas-miR393-5p
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: NA

Carica papaya

Stem-loop ID cpa-MIR393
Stem-loop Accession # MI0026366
Stem-loop Sequence
UCCAAAGGGAUCGCAUUGAUCCUUUACAAGGUGAAAGCAAUCUAUAUAUAUAUAUGUGUGUGUGUGUAUAUAAGUCUGUCUCCUGUAUAUAUAGAGUUUAGGAUCAUGCUAUCCCUUUGGAUU
Chromosome Location -
Mature MicroRNA miRBase Accession #: MIMAT0031814
miRBase ID: cpa-miR393
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: NA

Glycine max

Stem-loop ID gma-MIR393c
Stem-loop Accession # MI0021704
Stem-loop Sequence
GGAGGAGGCAUCCAAAGGGAUCGCAUUGAUCCCAAAUUUCAGAUUUAUAAAUUUUUCUCUUUCCCUCCCCUUCUCAAUAUUUGGGAUCAUGCUAUCCCUUUGGAUUCCUCCUU
Chromosome Location -
Mature MicroRNA miRBase Accession #: MIMAT0024910
miRBase ID: gma-miR393c-5p
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: NA

Stem-loop ID gma-MIR393d
Stem-loop Accession # MI0021705
Stem-loop Sequence
CUAGAGGAGGCAUCCAAAGGGAUCGCAUUGAUCCCAAAUCCAAGCUUCAAUGUUCUUCUAUCUUUCUCACUCAAAAUAUUAAUUUUAUUUGGGAUCAUGCUAUCCCUUUGGAUUUCUCCUUUA
Chromosome Location -
Mature MicroRNA miRBase Accession #: MIMAT0024911
miRBase ID: gma-miR393d
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: NA

Stem-loop ID gma-MIR393e
Stem-loop Accession # MI0021706
Stem-loop Sequence
GGAGGAGGCAUCCAAAGGGAUCGCAUUGAUCCCAAAUUUCAGAUUUAUAAAUUUGUCUUUCUCUUCCCUUGUCAAUAUUUGGGAUCAUUUCUCUUCCCUUCUCAAUAUUUGGGAUCAUGCUAUCCCUUUGGAUUCCUCCUU
Chromosome Location -
Mature MicroRNA miRBase Accession #: MIMAT0024912
miRBase ID: gma-miR393e
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: NA

Stem-loop ID gma-MIR393f
Stem-loop Accession # MI0021707
Stem-loop Sequence
GGAGGAGGCAUCCAAAGGGAUCGCAUUGAUCCCAAAUCCAAGCUUUAAUAUUUUUCUCUCUUCUCACUCAAUAAUAUUAAUUUAUUUGGGAUCAUGCUAUCCCUUUGGAUUUCUCCUU
Chromosome Location -
Mature MicroRNA miRBase Accession #: MIMAT0024913
miRBase ID: gma-miR393f
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: NA

Stem-loop ID gma-MIR393g
Stem-loop Accession # MI0021708
Stem-loop Sequence
AGAGGAGGCAUCCAAAGGGAUCGCAUUGAUCCCAAAUCCAAGCUUCAAUGUUCUUCUCUCUUUCUCACUCAAAAUGUUAAUUUUAUUUGGGAUCAUGCUAUCCCUUUGGAUGUCUCCUU
Chromosome Location -
Mature MicroRNA miRBase Accession #: MIMAT0024914
miRBase ID: gma-miR393g
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: NA

Helianthus tuberosus

Stem-loop ID htu-MIR393a
Stem-loop Accession # MI0022251
Stem-loop Sequence
GGUUGAAGCUUCCAAAGGGAUCGCAUUGAUCCAUCUGUCCACUCGGAUUUCAAUCUCAGUUGAUAAUUUGGAUCAUGCGAUCUCUUCGGAAGCUUCCUCC
Chromosome Location -
Mature MicroRNA miRBase Accession #: MIMAT0025511
miRBase ID: htu-miR393a
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: NA

Stem-loop ID htu-MIR393b
Stem-loop Accession # MI0022252
Stem-loop Sequence
GGUUGAAGCUUCCAAAGGGAUCGCAUUGAUCCAUCUGUCCACUCGGAUUUCAAUCUCAGUUGAUAAUUUGGAUCAUGCGAUCUCUUCGGAAGCUUCCUCCAUCGC
Chromosome Location -
Mature MicroRNA miRBase Accession #: MIMAT0025512
miRBase ID: htu-miR393b
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: NA

Stem-loop ID htu-MIR393c
Stem-loop Accession # MI0022253
Stem-loop Sequence
AGCGGGUUGAAGUUUCCAAAGGGAUCGCAUUGAUCCAUCUGUCCACUCGGAUUUCAAUCUCAGUUGAUAAUUUGGAUCAUGCGAUCUCUUCGGAAGCUUCC
Chromosome Location -
Mature MicroRNA miRBase Accession #: MIMAT0025513
miRBase ID: htu-miR393c
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: NA

Manihot esculenta

Stem-loop ID mes-MIR393b
Stem-loop Accession # MI0024305
Stem-loop Sequence
GCAACUAGAGGAGACAUCCAAAGGGAUCGCAUUGAUCCUAAGCUCUUCUUCUCUCCCCGUAUUUUAAUCUUUUGGAUCAUGCUAUCCCUUUGGAUUCCUCCUUUGGUAGC
Chromosome Location -
Mature MicroRNA miRBase Accession #: MIMAT0029263
miRBase ID: mes-miR393b
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: NA

Solanum tuberosum

Stem-loop ID stu-MIR393
Stem-loop Accession # MI0025978
Stem-loop Sequence
UCCAAAGGGAUCGCAUUGAUCCUGUGUCCCAAAUUAAUUAACUGGGGUCUAUGGGAUCAUGCGAUCUCUUCGGAAU
Chromosome Location -
Mature MicroRNA miRBase Accession #: MIMAT0031324
miRBase ID: stu-miR393-5p
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: NA

Theobroma cacao

Stem-loop ID tcc-MIR393a
Stem-loop Accession # MI0017505
Stem-loop Sequence
GCCAAGUACUAGAGGAGGCAUCCAAAGGGAUCGCAUUGAUCCUUUAUUUUCAACCCUUUCUUCUUUCUCACAAUUUUGGAUCAUGCUAUCCCUUUGGAUUCCUCCUUUGGUUAGCUUU
Chromosome Location -
Mature MicroRNA miRBase Accession #: MIMAT0020421
miRBase ID: tcc-miR393a
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: NA

Zea mays

Stem-loop ID zma-MIR393b
Stem-loop Accession # MI0013210
Stem-loop Sequence
GUCCAAAGGGAUCGCAUUGAUCCAUCAUUCCUUCCAUUUUUUCAUGCAUGGCUGGUCUUCGUCGUCUGCAAGGACUUGUCGAUGGAUCAAUGCGAUCCUUUUGGAGGC
Chromosome Location -
Mature MicroRNA miRBase Accession #: MIMAT0013999
miRBase ID: zma-miR393b-5p
Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC
Chromosome Location: NA


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