| Assay Name: | ath-miR393a-5p |
|---|---|
| miRBase Accession Number: | MI0001003 |
| miRBase Version: | v22 |
Gene Family ID: | MIPF0000083, MIR393 |
Mature miRNA Sequence: | UCCAAAGGGAUCGCAUUGAUCC |
| Species | miRBase ID | miRBase Accession Number |
|---|---|---|
| Arabidopsis | ath-miR393a-5p | MIMAT0000934 |
| Arabidopsis | ath-miR393b-5p | MIMAT0000935 |
| Amborella trichopoda | atr-miR393 | MIMAT0033935 |
| Arabidopsis lyrata | aly-miR393a-5p | MIMAT0017539 |
| Arabidopsis lyrata | aly-miR393b-5p | MIMAT0017541 |
| Camelina sativa | cas-miR393-5p | MIMAT0045337 |
| View More Rows | ||
| Carica papaya | cpa-miR393 | MIMAT0031814 |
| Glycine max | gma-miR393c-5p | MIMAT0024910 |
| Glycine max | gma-miR393d | MIMAT0024911 |
| Glycine max | gma-miR393e | MIMAT0024912 |
| Glycine max | gma-miR393f | MIMAT0024913 |
| Glycine max | gma-miR393g | MIMAT0024914 |
| Helianthus tuberosus | htu-miR393a | MIMAT0025511 |
| Helianthus tuberosus | htu-miR393b | MIMAT0025512 |
| Helianthus tuberosus | htu-miR393c | MIMAT0025513 |
| Manihot esculenta | mes-miR393b | MIMAT0029263 |
| Solanum tuberosum | stu-miR393-5p | MIMAT0031324 |
| Theobroma cacao | tcc-miR393a | MIMAT0020421 |
| Zea mays | zma-miR393b-5p | MIMAT0013999 |
| Stem-loop ID | ath-MIR393a |
| Stem-loop Accession # | MI0001003 |
| Stem-loop Sequence | AGAGGAAGGAUCCAAAGGGAUCGCAUUGAUCCUAAUUAAGGUGAAUUCUCCCCAUAUUUUCUUUAUAAUUGGCAAAUAAAUCACAAAAAUUUGCUUGGUUUUGGAUCAUGCUAUCUCUUUGGAUUCAUCCUUC |
| Chromosome Location | Chr. 2 - 16652101 - 16652233 [+] on Build TAIR10 |
| Mature MicroRNA |
miRBase Accession #: MIMAT0000934
miRBase ID: ath-miR393a-5p Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: Chr. 2 - 16652101 - 16652233 [+] on Build TAIR10 |
| Stem-loop ID | ath-MIR393b |
| Stem-loop Accession # | MI0001004 |
| Stem-loop Sequence | AGAGAAAGGAUCCAAAGGGAUCGCAUUGAUCCUAAUUAAGCUGAUUUAUUCCCCAAUAAUUGUUUUUUUUUUCCUUCUCAAUCGAAAGAUGGAAGAAAAACAAAUUCCAAACAUUUUGCUUACUUUUCCGGAUCAUGCGAUCUCUUUGGAUUCAUUCUUU |
| Chromosome Location | Chr. 3 - 20691647 - 20691806 [+] on Build TAIR10 |
| Mature MicroRNA |
miRBase Accession #: MIMAT0000935
miRBase ID: ath-miR393b-5p Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: Chr. 3 - 20691647 - 20691806 [+] on Build TAIR10 |
| Stem-loop ID | atr-MIR393 |
| Stem-loop Accession # | MI0027532 |
| Stem-loop Sequence | UUACGGUGGAGUUACAAAAGCGGUUUUGAUCUAGUAAGAAGCGGAUUUGGGGUUGCAGAGGGUGGAGAAAUCCAAAGGGAUCGCAUUGAUCCUUUUCAGUGCAAGCGGUUUUCCAAGGAUCAUGCGGUCUCUUAGGAUGUCUCCAUCUUAAUGCAAUAAAAUUGAGCUCCUCUUGUGAAAAGACAUUGAAGGUGGUUUCAGGUGA |
| Chromosome Location | - |
| Mature MicroRNA |
miRBase Accession #: MIMAT0033935
miRBase ID: atr-miR393 Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: NA |
| Stem-loop ID | aly-MIR393a |
| Stem-loop Accession # | MI0014572 |
| Stem-loop Sequence | AGCAACUAGAGGAAGGAUCCAAAGGGAUCGCAUUGAUCCUAAUAAAGGUGAAUUACCCCAAUCUUUUCUUAAUAAUUAGCAAACAAAUCAAAAAAAUUUGCUUGGUUUUGGAUCAUGCUAUCUCUUUGGAUUCAUCCUUCGGUAGCU |
| Chromosome Location | - |
| Mature MicroRNA |
miRBase Accession #: MIMAT0017539
miRBase ID: aly-miR393a-5p Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: NA |
| Stem-loop ID | aly-MIR393b |
| Stem-loop Accession # | MI0014573 |
| Stem-loop Sequence | AGCAACUAGAGAAAGCAUCCAAAGGGAUCGCAUUGAUCCUAAUUAAGCUGAUUUAUUCCCCAAUAUUUUAUUUUCCUCAUUCGAAAGUUGGAGAAAAAAAAAAAAAAUUCUAAACAUUUGCUUUCUUUUCCGGAUCAUGCGAUCUCUUUGGAUUCAUUCUUUGGUAGCU |
| Chromosome Location | - |
| Mature MicroRNA |
miRBase Accession #: MIMAT0017541
miRBase ID: aly-miR393b-5p Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: NA |
| Stem-loop ID | cas-MIR393 |
| Stem-loop Accession # | MI0037218 |
| Stem-loop Sequence | AGGAUCCAAAGGGAUCGCAUUGAUCCUAAUUAAGGUGAAUUCUCCCCGUUCCAAAGAAAUCGCAAAAAAUUUGCUUGGUUUUGGAUCAUGCUAUCUCUUUGGAUUCA |
| Chromosome Location | - |
| Mature MicroRNA |
miRBase Accession #: MIMAT0045337
miRBase ID: cas-miR393-5p Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: NA |
| Stem-loop ID | cpa-MIR393 |
| Stem-loop Accession # | MI0026366 |
| Stem-loop Sequence | UCCAAAGGGAUCGCAUUGAUCCUUUACAAGGUGAAAGCAAUCUAUAUAUAUAUAUGUGUGUGUGUGUAUAUAAGUCUGUCUCCUGUAUAUAUAGAGUUUAGGAUCAUGCUAUCCCUUUGGAUU |
| Chromosome Location | - |
| Mature MicroRNA |
miRBase Accession #: MIMAT0031814
miRBase ID: cpa-miR393 Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: NA |
| Stem-loop ID | gma-MIR393c |
| Stem-loop Accession # | MI0021704 |
| Stem-loop Sequence | GGAGGAGGCAUCCAAAGGGAUCGCAUUGAUCCCAAAUUUCAGAUUUAUAAAUUUUUCUCUUUCCCUCCCCUUCUCAAUAUUUGGGAUCAUGCUAUCCCUUUGGAUUCCUCCUU |
| Chromosome Location | - |
| Mature MicroRNA |
miRBase Accession #: MIMAT0024910
miRBase ID: gma-miR393c-5p Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: NA |
| Stem-loop ID | gma-MIR393d |
| Stem-loop Accession # | MI0021705 |
| Stem-loop Sequence | CUAGAGGAGGCAUCCAAAGGGAUCGCAUUGAUCCCAAAUCCAAGCUUCAAUGUUCUUCUAUCUUUCUCACUCAAAAUAUUAAUUUUAUUUGGGAUCAUGCUAUCCCUUUGGAUUUCUCCUUUA |
| Chromosome Location | - |
| Mature MicroRNA |
miRBase Accession #: MIMAT0024911
miRBase ID: gma-miR393d Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: NA |
| Stem-loop ID | gma-MIR393e |
| Stem-loop Accession # | MI0021706 |
| Stem-loop Sequence | GGAGGAGGCAUCCAAAGGGAUCGCAUUGAUCCCAAAUUUCAGAUUUAUAAAUUUGUCUUUCUCUUCCCUUGUCAAUAUUUGGGAUCAUUUCUCUUCCCUUCUCAAUAUUUGGGAUCAUGCUAUCCCUUUGGAUUCCUCCUU |
| Chromosome Location | - |
| Mature MicroRNA |
miRBase Accession #: MIMAT0024912
miRBase ID: gma-miR393e Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: NA |
| Stem-loop ID | gma-MIR393f |
| Stem-loop Accession # | MI0021707 |
| Stem-loop Sequence | GGAGGAGGCAUCCAAAGGGAUCGCAUUGAUCCCAAAUCCAAGCUUUAAUAUUUUUCUCUCUUCUCACUCAAUAAUAUUAAUUUAUUUGGGAUCAUGCUAUCCCUUUGGAUUUCUCCUU |
| Chromosome Location | - |
| Mature MicroRNA |
miRBase Accession #: MIMAT0024913
miRBase ID: gma-miR393f Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: NA |
| Stem-loop ID | gma-MIR393g |
| Stem-loop Accession # | MI0021708 |
| Stem-loop Sequence | AGAGGAGGCAUCCAAAGGGAUCGCAUUGAUCCCAAAUCCAAGCUUCAAUGUUCUUCUCUCUUUCUCACUCAAAAUGUUAAUUUUAUUUGGGAUCAUGCUAUCCCUUUGGAUGUCUCCUU |
| Chromosome Location | - |
| Mature MicroRNA |
miRBase Accession #: MIMAT0024914
miRBase ID: gma-miR393g Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: NA |
| Stem-loop ID | htu-MIR393a |
| Stem-loop Accession # | MI0022251 |
| Stem-loop Sequence | GGUUGAAGCUUCCAAAGGGAUCGCAUUGAUCCAUCUGUCCACUCGGAUUUCAAUCUCAGUUGAUAAUUUGGAUCAUGCGAUCUCUUCGGAAGCUUCCUCC |
| Chromosome Location | - |
| Mature MicroRNA |
miRBase Accession #: MIMAT0025511
miRBase ID: htu-miR393a Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: NA |
| Stem-loop ID | htu-MIR393b |
| Stem-loop Accession # | MI0022252 |
| Stem-loop Sequence | GGUUGAAGCUUCCAAAGGGAUCGCAUUGAUCCAUCUGUCCACUCGGAUUUCAAUCUCAGUUGAUAAUUUGGAUCAUGCGAUCUCUUCGGAAGCUUCCUCCAUCGC |
| Chromosome Location | - |
| Mature MicroRNA |
miRBase Accession #: MIMAT0025512
miRBase ID: htu-miR393b Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: NA |
| Stem-loop ID | htu-MIR393c |
| Stem-loop Accession # | MI0022253 |
| Stem-loop Sequence | AGCGGGUUGAAGUUUCCAAAGGGAUCGCAUUGAUCCAUCUGUCCACUCGGAUUUCAAUCUCAGUUGAUAAUUUGGAUCAUGCGAUCUCUUCGGAAGCUUCC |
| Chromosome Location | - |
| Mature MicroRNA |
miRBase Accession #: MIMAT0025513
miRBase ID: htu-miR393c Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: NA |
| Stem-loop ID | mes-MIR393b |
| Stem-loop Accession # | MI0024305 |
| Stem-loop Sequence | GCAACUAGAGGAGACAUCCAAAGGGAUCGCAUUGAUCCUAAGCUCUUCUUCUCUCCCCGUAUUUUAAUCUUUUGGAUCAUGCUAUCCCUUUGGAUUCCUCCUUUGGUAGC |
| Chromosome Location | - |
| Mature MicroRNA |
miRBase Accession #: MIMAT0029263
miRBase ID: mes-miR393b Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: NA |
| Stem-loop ID | stu-MIR393 |
| Stem-loop Accession # | MI0025978 |
| Stem-loop Sequence | UCCAAAGGGAUCGCAUUGAUCCUGUGUCCCAAAUUAAUUAACUGGGGUCUAUGGGAUCAUGCGAUCUCUUCGGAAU |
| Chromosome Location | - |
| Mature MicroRNA |
miRBase Accession #: MIMAT0031324
miRBase ID: stu-miR393-5p Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: NA |
| Stem-loop ID | tcc-MIR393a |
| Stem-loop Accession # | MI0017505 |
| Stem-loop Sequence | GCCAAGUACUAGAGGAGGCAUCCAAAGGGAUCGCAUUGAUCCUUUAUUUUCAACCCUUUCUUCUUUCUCACAAUUUUGGAUCAUGCUAUCCCUUUGGAUUCCUCCUUUGGUUAGCUUU |
| Chromosome Location | - |
| Mature MicroRNA |
miRBase Accession #: MIMAT0020421
miRBase ID: tcc-miR393a Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: NA |
| Stem-loop ID | zma-MIR393b |
| Stem-loop Accession # | MI0013210 |
| Stem-loop Sequence | GUCCAAAGGGAUCGCAUUGAUCCAUCAUUCCUUCCAUUUUUUCAUGCAUGGCUGGUCUUCGUCGUCUGCAAGGACUUGUCGAUGGAUCAAUGCGAUCCUUUUGGAGGC |
| Chromosome Location | - |
| Mature MicroRNA |
miRBase Accession #: MIMAT0013999
miRBase ID: zma-miR393b-5p Mature miRNA Sequence: UCCAAAGGGAUCGCAUUGAUCC Chromosome Location: NA |